pyFTS/benchmarks/benchmarks.py
Petrônio Cândido de Lima e Silva fa676f9f1d - Parallel sliding window benchmarks
2017-04-04 18:39:15 -03:00

1382 lines
53 KiB
Python

#!/usr/bin/python
# -*- coding: utf8 -*-
import numpy as np
import pandas as pd
import time
import datetime
import matplotlib as plt
import matplotlib.colors as pltcolors
import matplotlib.cm as cmx
import matplotlib.pyplot as plt
from mpl_toolkits.mplot3d import Axes3D
# from sklearn.cross_validation import KFold
from pyFTS.partitioners import partitioner, Grid, Huarng, Entropy, FCM
from pyFTS.benchmarks import Measures, naive, arima, ResidualAnalysis, ProbabilityDistribution
from pyFTS.common import Membership, FuzzySet, FLR, Transformations, Util
from pyFTS import fts, chen, yu, ismailefendi, sadaei, hofts, hwang, pwfts, ifts
from copy import deepcopy
colors = ['grey', 'rosybrown', 'maroon', 'red','orange', 'yellow', 'olive', 'green',
'cyan', 'blue', 'darkblue', 'purple', 'darkviolet']
ncol = len(colors)
styles = ['-','--','-.',':','.']
nsty = len(styles)
def get_benchmark_point_methods():
return [naive.Naive, arima.ARIMA]
def get_point_methods():
return [chen.ConventionalFTS, yu.WeightedFTS, ismailefendi.ImprovedWeightedFTS,
sadaei.ExponentialyWeightedFTS, hofts.HighOrderFTS, pwfts.ProbabilisticWeightedFTS]
def get_interval_methods():
return [ifts.IntervalFTS, pwfts.ProbabilisticWeightedFTS]
def save_dataframe_point(experiments, file, objs, rmse, save, sintetic, smape, times, u):
ret = []
if sintetic:
for k in sorted(objs.keys()):
try:
mod = []
mfts = objs[k]
mod.append(mfts.shortname)
mod.append(mfts.order)
mod.append(mfts.partitioner.name)
mod.append(mfts.partitioner.partitions)
mod.append(len(mfts))
mod.append(np.round(np.nanmean(rmse[k]), 2))
mod.append(np.round(np.nanstd(rmse[k]), 2))
mod.append(np.round(np.nanmean(smape[k]), 2))
mod.append(np.round(np.nanstd(smape[k]), 2))
mod.append(np.round(np.nanmean(u[k]), 2))
mod.append(np.round(np.nanstd(u[k]), 2))
mod.append(np.round(np.nanmean(times[k]), 4))
ret.append(mod)
except Exception as ex:
print("Erro ao salvar ", k)
print("Exceção ", ex)
columns = ["Model", "Order", "Scheme","Partitions", "Size", "RMSEAVG", "RMSESTD", "SMAPEAVG", "SMAPESTD", "UAVG", "USTD", "TIMEAVG"]
else:
for k in sorted(objs.keys()):
try:
mfts = objs[k]
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts), 'RMSE']
tmp.extend(rmse[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts), 'SMAPE']
tmp.extend(smape[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts), 'U']
tmp.extend(u[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts), 'TIME']
tmp.extend(times[k])
ret.append(deepcopy(tmp))
except Exception as ex:
print("Erro ao salvar ", k)
print("Exceção ", ex)
columns = [str(k) for k in np.arange(0, experiments)]
columns.insert(0, "Model")
columns.insert(1, "Order")
columns.insert(2, "Scheme")
columns.insert(3, "Partitions")
columns.insert(4, "Size")
columns.insert(5, "Measure")
dat = pd.DataFrame(ret, columns=columns)
if save: dat.to_csv(Util.uniquefilename(file), sep=";")
return dat
def external_point_sliding_window(models, parameters, data, windowsize,train=0.8, dump=False, save=False, file=None, sintetic=True):
objs = {}
lcolors = {}
rmse = {}
smape = {}
u = {}
times = {}
experiments = 0
for ct, train, test in Util.sliding_window(data, windowsize, train):
experiments += 1
for count, method in enumerate(models, start=0):
model = method("")
_start = time.time()
model.train(train, None, parameters=parameters[count])
_end = time.time()
_key = model.shortname
if dump: print(ct, _key)
if _key not in objs:
objs[_key] = model
lcolors[_key] = colors[count % ncol]
rmse[_key] = []
smape[_key] = []
u[_key] = []
times[_key] = []
_tdiff = _end - _start
try:
_start = time.time()
_rmse, _smape, _u = get_point_statistics(test, model, None)
_end = time.time()
rmse[_key].append(_rmse)
smape[_key].append(_smape)
u[_key].append(_u)
_tdiff += _end - _start
times[_key].append(_tdiff)
if dump: print(_rmse, _smape, _u, _tdiff)
except:
rmse[_key].append(np.nan)
smape[_key].append(np.nan)
u[_key].append(np.nan)
times[_key].append(np.nan)
return save_dataframe_point(experiments, file, objs, rmse, save, sintetic, smape, times, u)
def point_sliding_window(data, windowsize, train=0.8,models=None,partitioners=[Grid.GridPartitioner],
partitions=[10], max_order=3,transformation=None,indexer=None,dump=False,
save=False, file=None, sintetic=True):
_process_start = time.time()
print("Process Start: {0: %H:%M:%S}".format(datetime.datetime.now()))
if models is None:
models = get_point_methods()
objs = {}
lcolors = {}
rmse = {}
smape = {}
u = {}
times = {}
experiments = 0
for ct, train,test in Util.sliding_window(data, windowsize, train):
experiments += 1
for partition in partitions:
for partitioner in partitioners:
pttr = str(partitioner.__module__).split('.')[-1]
data_train_fs = partitioner(train, partition, transformation=transformation)
for count, model in enumerate(models, start=0):
mfts = model("")
_key = mfts.shortname + " " + pttr + " q = " + str(partition)
mfts.partitioner = data_train_fs
if not mfts.isHighOrder:
if dump: print(ct,_key)
if _key not in objs:
objs[_key] = mfts
lcolors[_key] = colors[count % ncol]
rmse[_key] = []
smape[_key] = []
u[_key] = []
times[_key] = []
if transformation is not None:
mfts.appendTransformation(transformation)
_start = time.time()
mfts.train(train, data_train_fs.sets)
_end = time.time()
times[_key].append(_end - _start)
_start = time.time()
_rmse, _smape, _u = get_point_statistics(test, mfts, indexer)
_end = time.time()
rmse[_key].append(_rmse)
smape[_key].append(_smape)
u[_key].append(_u)
times[_key].append(_end - _start)
if dump: print(_rmse, _smape, _u)
else:
for order in np.arange(1, max_order + 1):
if order >= mfts.minOrder:
mfts = model("")
_key = mfts.shortname + " n = " + str(order) + " " + pttr + " q = " + str(partition)
mfts.partitioner = data_train_fs
if dump: print(ct,_key)
if _key not in objs:
objs[_key] = mfts
lcolors[_key] = colors[count % ncol]
rmse[_key] = []
smape[_key] = []
u[_key] = []
times[_key] = []
if transformation is not None:
mfts.appendTransformation(transformation)
try:
_start = time.time()
mfts.train(train, data_train_fs.sets, order=order)
_end = time.time()
times[_key].append(_end - _start)
_start = time.time()
_rmse, _smape, _u = get_point_statistics(test, mfts, indexer)
_end = time.time()
rmse[_key].append(_rmse)
smape[_key].append(_smape)
u[_key].append(_u)
times[_key].append(_end - _start)
if dump: print(_rmse, _smape, _u)
except Exception as e:
print(e)
rmse[_key].append(np.nan)
smape[_key].append(np.nan)
u[_key].append(np.nan)
times[_key].append(np.nan)
_process_end = time.time()
print("Process End: {0: %H:%M:%S}".format(datetime.datetime.now()))
print("Process Duration: {0}".format(_process_end - _process_start))
return save_dataframe_point(experiments, file, objs, rmse, save, sintetic, smape, times, u)
def all_point_forecasters(data_train, data_test, partitions, max_order=3, statistics=True, residuals=True,
series=True, save=False, file=None, tam=[20, 5], models=None, transformation=None,
distributions=False):
if models is None:
models = get_point_methods()
objs = []
data_train_fs = Grid.GridPartitioner(data_train, partitions, transformation=transformation)
count = 1
lcolors = []
for count, model in enumerate(models, start=0):
#print(model)
mfts = model("")
if not mfts.isHighOrder:
if transformation is not None:
mfts.appendTransformation(transformation)
mfts.train(data_train, data_train_fs.sets)
objs.append(mfts)
lcolors.append( colors[count % ncol] )
else:
for order in np.arange(1,max_order+1):
if order >= mfts.minOrder:
mfts = model(" n = " + str(order))
if transformation is not None:
mfts.appendTransformation(transformation)
mfts.train(data_train, data_train_fs.sets, order=order)
objs.append(mfts)
lcolors.append(colors[(count + order) % ncol])
if statistics:
print_point_statistics(data_test, objs)
if residuals:
print(ResidualAnalysis.compareResiduals(data_test, objs))
ResidualAnalysis.plot_residuals(data_test, objs, save=save, file=file, tam=tam)
if series:
plot_compared_series(data_test, objs, lcolors, typeonlegend=False, save=save, file=file, tam=tam,
intervals=False)
if distributions:
lcolors.insert(0,'black')
pmfs = []
pmfs.append(
ProbabilityDistribution.ProbabilityDistribution("Original", 100, [min(data_test), max(data_test)], data=data_test) )
for m in objs:
forecasts = m.forecast(data_test)
pmfs.append(
ProbabilityDistribution.ProbabilityDistribution(m.shortname, 100, [min(data_test), max(data_test)],
data=forecasts))
print(getProbabilityDistributionStatistics(pmfs,data_test))
plot_probability_distributions(pmfs, lcolors, tam=tam)
def get_point_statistics(data, model, indexer=None):
if indexer is not None:
ndata = np.array(indexer.get_data(data[model.order:]))
else:
ndata = np.array(data[model.order:])
if model.isMultivariate or indexer is None:
forecasts = model.forecast(data)
elif not model.isMultivariate and indexer is not None:
forecasts = model.forecast(indexer.get_data(data))
if model.hasSeasonality:
nforecasts = np.array(forecasts)
else:
nforecasts = np.array(forecasts[:-1])
ret = list()
try:
ret.append(np.round(Measures.rmse(ndata, nforecasts), 2))
except:
ret.append(np.nan)
try:
ret.append(np.round(Measures.smape(ndata, nforecasts), 2))
except:
ret.append(np.nan)
try:
ret.append(np.round(Measures.UStatistic(ndata, nforecasts), 2))
except:
ret.append(np.nan)
return ret
def print_point_statistics(data, models, externalmodels = None, externalforecasts = None, indexers=None):
ret = "Model & Order & RMSE & SMAPE & Theil's U \\\\ \n"
for count,model in enumerate(models,start=0):
_rmse, _smape, _u = get_point_statistics(data, model, indexers)
ret += model.shortname + " & "
ret += str(model.order) + " & "
ret += str(_rmse) + " & "
ret += str(_smape)+ " & "
ret += str(_u)
#ret += str(round(Measures.TheilsInequality(np.array(data[fts.order:]), np.array(forecasts[:-1])), 4))
ret += " \\\\ \n"
if externalmodels is not None:
l = len(externalmodels)
for k in np.arange(0,l):
ret += externalmodels[k] + " & "
ret += " 1 & "
ret += str(round(Measures.rmse(data, externalforecasts[k][:-1]), 2)) + " & "
ret += str(round(Measures.smape(data, externalforecasts[k][:-1]), 2))+ " & "
ret += str(round(Measures.UStatistic(data, externalforecasts[k][:-1]), 2))
ret += " \\\\ \n"
print(ret)
def getProbabilityDistributionStatistics(pmfs, data):
ret = "Model & Entropy & Empirical Likelihood & Pseudo Likelihood \\\\ \n"
for k in pmfs:
ret += k.name + " & "
ret += str(k.entropy()) + " & "
ret += str(k.empiricalloglikelihood())+ " & "
ret += str(k.pseudologlikelihood(data))
ret += " \\\\ \n"
return ret
def save_dataframe_interval(coverage, experiments, file, objs, resolution, save, sharpness, sintetic, times):
ret = []
if sintetic:
for k in sorted(objs.keys()):
mod = []
mfts = objs[k]
mod.append(mfts.shortname)
mod.append(mfts.order)
mod.append(mfts.partitioner.name)
mod.append(mfts.partitioner.partitions)
mod.append(round(np.nanmean(sharpness[k]), 2))
mod.append(round(np.nanstd(sharpness[k]), 2))
mod.append(round(np.nanmean(resolution[k]), 2))
mod.append(round(np.nanstd(resolution[k]), 2))
mod.append(round(np.nanmean(coverage[k]), 2))
mod.append(round(np.nanstd(coverage[k]), 2))
mod.append(round(np.nanmean(times[k]), 2))
mod.append(round(np.nanstd(times[k]), 2))
mod.append(len(mfts))
ret.append(mod)
columns = ["Model", "Order", "Scheme", "Partitions", "SHARPAVG", "SHARPSTD", "RESAVG", "RESSTD", "COVAVG",
"COVSTD", "TIMEAVG", "TIMESTD", "SIZE"]
else:
for k in sorted(objs.keys()):
try:
mfts = objs[k]
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts),
'Sharpness']
tmp.extend(sharpness[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts),
'Resolution']
tmp.extend(resolution[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts),
'Coverage']
tmp.extend(coverage[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts),
'TIME']
tmp.extend(times[k])
ret.append(deepcopy(tmp))
except Exception as ex:
print("Erro ao salvar ", k)
print("Exceção ", ex)
columns = [str(k) for k in np.arange(0, experiments)]
columns.insert(0, "Model")
columns.insert(1, "Order")
columns.insert(2, "Scheme")
columns.insert(3, "Partitions")
columns.insert(4, "Size")
columns.insert(5, "Measure")
dat = pd.DataFrame(ret, columns=columns)
if save: dat.to_csv(Util.uniquefilename(file), sep=";")
return dat
def interval_sliding_window(data, windowsize, train=0.8,models=None,partitioners=[Grid.GridPartitioner],
partitions=[10], max_order=3,transformation=None,indexer=None,dump=False,
save=False, file=None, sintetic=True):
if models is None:
models = get_interval_methods()
objs = {}
lcolors = {}
sharpness = {}
resolution = {}
coverage = {}
times = {}
experiments = 0
for ct, training,test in Util.sliding_window(data, windowsize, train):
experiments += 1
for partition in partitions:
for partitioner in partitioners:
pttr = str(partitioner.__module__).split('.')[-1]
data_train_fs = partitioner(training, partition, transformation=transformation)
for count, model in enumerate(models, start=0):
mfts = model("")
_key = mfts.shortname + " " + pttr+ " q = " +str(partition)
mfts.partitioner = data_train_fs
if not mfts.isHighOrder:
if dump: print(ct,_key)
if _key not in objs:
objs[_key] = mfts
lcolors[_key] = colors[count % ncol]
sharpness[_key] = []
resolution[_key] = []
coverage[_key] = []
times[_key] = []
if transformation is not None:
mfts.appendTransformation(transformation)
_start = time.time()
mfts.train(training, data_train_fs.sets)
_end = time.time()
_tdiff = _end - _start
_start = time.time()
_sharp, _res, _cov = get_interval_statistics(test, mfts)
_end = time.time()
_tdiff += _end - _start
sharpness[_key].append(_sharp)
resolution[_key].append(_res)
coverage[_key].append(_cov)
times[_key].append(_tdiff)
else:
for order in np.arange(1, max_order + 1):
if order >= mfts.minOrder:
mfts = model("")
_key = mfts.shortname + " n = " + str(order) + " " + pttr + " q = " + str(partition)
mfts.partitioner = data_train_fs
if dump: print(ct,_key)
if _key not in objs:
objs[_key] = mfts
lcolors[_key] = colors[count % ncol]
sharpness[_key] = []
resolution[_key] = []
coverage[_key] = []
times[_key] = []
if transformation is not None:
mfts.appendTransformation(transformation)
_start = time.time()
mfts.train(training, data_train_fs.sets, order=order)
_end = time.time()
_tdiff = _end - _start
_start = time.time()
_sharp, _res, _cov = get_interval_statistics(test, mfts)
_end = time.time()
_tdiff += _end - _start
sharpness[_key].append(_sharp)
resolution[_key].append(_res)
coverage[_key].append(_cov)
times[_key].append(_tdiff)
return save_dataframe_interval(coverage, experiments, file, objs, resolution, save, sharpness, sintetic, times)
def all_interval_forecasters(data_train, data_test, partitions, max_order=3,save=False, file=None, tam=[20, 5],
models=None, transformation=None):
if models is None:
models = get_interval_methods()
objs = []
data_train_fs = Grid.GridPartitioner(data_train,partitions, transformation=transformation).sets
lcolors = []
for count, model in Util.enumerate2(models, start=0, step=2):
mfts = model("")
if not mfts.isHighOrder:
if transformation is not None:
mfts.appendTransformation(transformation)
mfts.train(data_train, data_train_fs)
objs.append(mfts)
lcolors.append( colors[count % ncol] )
else:
for order in np.arange(1,max_order+1):
if order >= mfts.minOrder:
mfts = model(" n = " + str(order))
if transformation is not None:
mfts.appendTransformation(transformation)
mfts.train(data_train, data_train_fs, order=order)
objs.append(mfts)
lcolors.append(colors[count % ncol])
print_interval_statistics(data_test, objs)
plot_compared_series(data_test, objs, lcolors, typeonlegend=False, save=save, file=file, tam=tam, intervals=True)
def get_interval_statistics(original, model):
ret = list()
forecasts = model.forecastInterval(original)
ret.append(round(Measures.sharpness(forecasts), 2))
ret.append(round(Measures.resolution(forecasts), 2))
ret.append(round(Measures.coverage(original[model.order:], forecasts[:-1]), 2))
return ret
def print_interval_statistics(original, models):
ret = "Model & Order & Sharpness & Resolution & Coverage \\\\ \n"
for fts in models:
_sharp, _res, _cov = get_interval_statistics(original, fts)
ret += fts.shortname + " & "
ret += str(fts.order) + " & "
ret += str(_sharp) + " & "
ret += str(_res) + " & "
ret += str(_cov) + " \\\\ \n"
print(ret)
def plot_distribution(dist):
for k in dist.index:
alpha = np.array([dist[x][k] for x in dist]) * 100
x = [k for x in np.arange(0, len(alpha))]
y = dist.columns
plt.scatter(x, y, c=alpha, marker='s', linewidths=0, cmap='Oranges', norm=pltcolors.Normalize(vmin=0, vmax=1),
vmin=0, vmax=1, edgecolors=None)
def plot_compared_series(original, models, colors, typeonlegend=False, save=False, file=None, tam=[20, 5],
points=True, intervals=True, linewidth=1.5):
fig = plt.figure(figsize=tam)
ax = fig.add_subplot(111)
mi = []
ma = []
legends = []
ax.plot(original, color='black', label="Original", linewidth=linewidth*1.5)
for count, fts in enumerate(models, start=0):
if fts.hasPointForecasting and points:
forecasted = fts.forecast(original)
mi.append(min(forecasted) * 0.95)
ma.append(max(forecasted) * 1.05)
for k in np.arange(0, fts.order):
forecasted.insert(0, None)
lbl = fts.shortname
if typeonlegend: lbl += " (Point)"
ax.plot(forecasted, color=colors[count], label=lbl, ls="-",linewidth=linewidth)
if fts.hasIntervalForecasting and intervals:
forecasted = fts.forecastInterval(original)
lower = [kk[0] for kk in forecasted]
upper = [kk[1] for kk in forecasted]
mi.append(min(lower) * 0.95)
ma.append(max(upper) * 1.05)
for k in np.arange(0, fts.order):
lower.insert(0, None)
upper.insert(0, None)
lbl = fts.shortname
if typeonlegend: lbl += " (Interval)"
ax.plot(lower, color=colors[count], label=lbl, ls="--",linewidth=linewidth)
ax.plot(upper, color=colors[count], ls="--",linewidth=linewidth)
handles0, labels0 = ax.get_legend_handles_labels()
lgd = ax.legend(handles0, labels0, loc=2, bbox_to_anchor=(1, 1))
legends.append(lgd)
# ax.set_title(fts.name)
ax.set_ylim([min(mi), max(ma)])
ax.set_ylabel('F(T)')
ax.set_xlabel('T')
ax.set_xlim([0, len(original)])
Util.showAndSaveImage(fig, file, save, lgd=legends)
def plot_probability_distributions(pmfs, lcolors, tam=[15, 7]):
fig = plt.figure(figsize=tam)
ax = fig.add_subplot(111)
for k,m in enumerate(pmfs,start=0):
m.plot(ax, color=lcolors[k])
handles0, labels0 = ax.get_legend_handles_labels()
ax.legend(handles0, labels0)
def save_dataframe_ahead(experiments, file, objs, crps_interval, crps_distr, times1, times2, save, sintetic):
ret = []
if sintetic:
for k in sorted(objs.keys()):
try:
ret = []
for k in sorted(objs.keys()):
try:
mod = []
mfts = objs[k]
mod.append(mfts.shortname)
mod.append(mfts.order)
mod.append(mfts.partitioner.name)
mod.append(mfts.partitioner.partitions)
mod.append(np.round(np.nanmean(crps_interval[k]), 2))
mod.append(np.round(np.nanstd(crps_interval[k]), 2))
mod.append(np.round(np.nanmean(crps_distr[k]), 2))
mod.append(np.round(np.nanstd(crps_distr[k]), 2))
mod.append(len(mfts))
mod.append(np.round(np.nanmean(times1[k]), 4))
mod.append(np.round(np.nanmean(times2[k]), 4))
ret.append(mod)
except Exception as e:
print('Erro: %s' % e)
except Exception as ex:
print("Erro ao salvar ", k)
print("Exceção ", ex)
columns = ["Model", "Order", "Scheme", "Partitions", "CRPS1AVG", "CRPS1STD", "CRPS2AVG", "CRPS2STD",
"SIZE", "TIME1AVG", "TIME2AVG"]
else:
for k in sorted(objs.keys()):
try:
mfts = objs[k]
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts), 'CRPS_Interval']
tmp.extend(crps_interval[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts), 'CRPS_Distribution']
tmp.extend(crps_distr[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts), 'TIME_Interval']
tmp.extend(times1[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts), 'TIME_Distribution']
tmp.extend(times2[k])
ret.append(deepcopy(tmp))
except Exception as ex:
print("Erro ao salvar ", k)
print("Exceção ", ex)
columns = [str(k) for k in np.arange(0, experiments)]
columns.insert(0, "Model")
columns.insert(1, "Order")
columns.insert(2, "Scheme")
columns.insert(3, "Partitions")
columns.insert(4, "Size")
columns.insert(5, "Measure")
dat = pd.DataFrame(ret, columns=columns)
if save: dat.to_csv(Util.uniquefilename(file), sep=";")
return dat
def ahead_sliding_window(data, windowsize, train, steps, models=None, resolution = None, partitioners=[Grid.GridPartitioner],
partitions=[10], max_order=3,transformation=None,indexer=None,dump=False,
save=False, file=None, sintetic=False):
if models is None:
models = [pwfts.ProbabilisticWeightedFTS]
objs = {}
lcolors = {}
crps_interval = {}
crps_distr = {}
times1 = {}
times2 = {}
experiments = 0
for ct, train,test in Util.sliding_window(data, windowsize, train):
experiments += 1
for partition in partitions:
for partitioner in partitioners:
pttr = str(partitioner.__module__).split('.')[-1]
data_train_fs = partitioner(train, partition, transformation=transformation)
for count, model in enumerate(models, start=0):
mfts = model("")
_key = mfts.shortname + " " + pttr+ " q = " +str(partition)
mfts.partitioner = data_train_fs
if not mfts.isHighOrder:
if dump: print(ct,_key)
if _key not in objs:
objs[_key] = mfts
lcolors[_key] = colors[count % ncol]
crps_interval[_key] = []
crps_distr[_key] = []
times1[_key] = []
times2[_key] = []
if transformation is not None:
mfts.appendTransformation(transformation)
_start = time.time()
mfts.train(train, data_train_fs.sets)
_end = time.time()
_tdiff = _end - _start
_crps1, _crps2, _t1, _t2 = get_distribution_statistics(test,mfts,steps=steps,resolution=resolution)
crps_interval[_key].append(_crps1)
crps_distr[_key].append(_crps2)
times1[_key] = _tdiff + _t1
times2[_key] = _tdiff + _t2
if dump: print(_crps1, _crps2, _tdiff, _t1, _t2)
else:
for order in np.arange(1, max_order + 1):
if order >= mfts.minOrder:
mfts = model("")
_key = mfts.shortname + " n = " + str(order) + " " + pttr + " q = " + str(partition)
mfts.partitioner = data_train_fs
if dump: print(ct,_key)
if _key not in objs:
objs[_key] = mfts
lcolors[_key] = colors[count % ncol]
crps_interval[_key] = []
crps_distr[_key] = []
times1[_key] = []
times2[_key] = []
if transformation is not None:
mfts.appendTransformation(transformation)
_start = time.time()
mfts.train(train, data_train_fs.sets, order=order)
_end = time.time()
_tdiff = _end - _start
_crps1, _crps2, _t1, _t2 = get_distribution_statistics(test, mfts, steps=steps,
resolution=resolution)
crps_interval[_key].append(_crps1)
crps_distr[_key].append(_crps2)
times1[_key] = _tdiff + _t1
times2[_key] = _tdiff + _t2
if dump: print(_crps1, _crps2, _tdiff, _t1, _t2)
return save_dataframe_ahead(experiments, file, objs, crps_interval, crps_distr, times1, times2, save, sintetic)
def all_ahead_forecasters(data_train, data_test, partitions, start, steps, resolution = None, max_order=3,save=False, file=None, tam=[20, 5],
models=None, transformation=None, option=2):
if models is None:
models = [pwfts.ProbabilisticWeightedFTS]
if resolution is None: resolution = (max(data_train) - min(data_train)) / 100
objs = []
data_train_fs = Grid.GridPartitioner(data_train, partitions, transformation=transformation).sets
lcolors = []
for count, model in Util.enumerate2(models, start=0, step=2):
mfts = model("")
if not mfts.isHighOrder:
if transformation is not None:
mfts.appendTransformation(transformation)
mfts.train(data_train, data_train_fs)
objs.append(mfts)
lcolors.append( colors[count % ncol] )
else:
for order in np.arange(1,max_order+1):
if order >= mfts.minOrder:
mfts = model(" n = " + str(order))
if transformation is not None:
mfts.appendTransformation(transformation)
mfts.train(data_train, data_train_fs, order=order)
objs.append(mfts)
lcolors.append(colors[count % ncol])
distributions = [False for k in objs]
distributions[0] = True
print_distribution_statistics(data_test[start:], objs, steps, resolution)
plotComparedIntervalsAhead(data_test, objs, lcolors, distributions=distributions, time_from=start, time_to=steps,
interpol=False, save=save, file=file, tam=tam, resolution=resolution, option=option)
def get_distribution_statistics(original, model, steps, resolution):
ret = list()
try:
_s1 = time.time()
densities1 = model.forecastAheadDistribution(original,steps,resolution, parameters=3)
_e1 = time.time()
ret.append(round(Measures.crps(original, densities1), 3))
ret.append(round(_e1 - _s1, 3))
except Exception as e:
print('Erro: ', e)
ret.append(np.nan)
ret.append(np.nan)
try:
_s2 = time.time()
densities2 = model.forecastAheadDistribution(original, steps, resolution, parameters=2)
_e2 = time.time()
ret.append( round(Measures.crps(original, densities2), 3))
ret.append(round(_e2 - _s2, 3))
except:
ret.append(np.nan)
ret.append(np.nan)
return ret
def print_distribution_statistics(original, models, steps, resolution):
ret = "Model & Order & Interval & Distribution \\\\ \n"
for fts in models:
_crps1, _crps2, _t1, _t2 = get_distribution_statistics(original, fts, steps, resolution)
ret += fts.shortname + " & "
ret += str(fts.order) + " & "
ret += str(_crps1) + " & "
ret += str(_crps2) + " \\\\ \n"
print(ret)
def plotComparedIntervalsAhead(original, models, colors, distributions, time_from, time_to,
interpol=False, save=False, file=None, tam=[20, 5], resolution=None,
cmap='Blues',option=2):
fig = plt.figure(figsize=tam)
ax = fig.add_subplot(111)
cm = plt.get_cmap(cmap)
cNorm = pltcolors.Normalize(vmin=0, vmax=1)
scalarMap = cmx.ScalarMappable(norm=cNorm, cmap=cm)
if resolution is None: resolution = (max(original) - min(original)) / 100
mi = []
ma = []
for count, fts in enumerate(models, start=0):
if fts.hasDistributionForecasting and distributions[count]:
density = fts.forecastAheadDistribution(original[time_from - fts.order:time_from],
time_to, resolution, parameters=option)
Y = []
X = []
C = []
S = []
y = density.columns
t = len(y)
ss = time_to ** 2
for k in density.index:
#alpha = [scalarMap.to_rgba(density[col][k]) for col in density.columns]
col = [density[col][k]*5 for col in density.columns]
x = [time_from + k for x in np.arange(0, t)]
s = [ss for x in np.arange(0, t)]
ic = resolution/10
for cc in np.arange(0, resolution, ic):
Y.append(y + cc)
X.append(x)
C.append(col)
S.append(s)
Y = np.hstack(Y)
X = np.hstack(X)
C = np.hstack(C)
S = np.hstack(S)
s = ax.scatter(X, Y, c=C, marker='s',s=S, linewidths=0, edgecolors=None, cmap=cmap)
s.set_clim([0, 1])
cb = fig.colorbar(s)
cb.set_label('Density')
if fts.hasIntervalForecasting:
forecasts = fts.forecastAheadInterval(original[time_from - fts.order:time_from], time_to)
lower = [kk[0] for kk in forecasts]
upper = [kk[1] for kk in forecasts]
mi.append(min(lower))
ma.append(max(upper))
for k in np.arange(0, time_from - fts.order):
lower.insert(0, None)
upper.insert(0, None)
ax.plot(lower, color=colors[count], label=fts.shortname)
ax.plot(upper, color=colors[count])
else:
forecasts = fts.forecast(original)
mi.append(min(forecasts))
ma.append(max(forecasts))
for k in np.arange(0, time_from):
forecasts.insert(0, None)
ax.plot(forecasts, color=colors[count], label=fts.shortname)
ax.plot(original, color='black', label="Original")
handles0, labels0 = ax.get_legend_handles_labels()
ax.legend(handles0, labels0, loc=2)
# ax.set_title(fts.name)
_mi = min(mi)
if _mi < 0:
_mi *= 1.1
else:
_mi *= 0.9
_ma = max(ma)
if _ma < 0:
_ma *= 0.9
else:
_ma *= 1.1
ax.set_ylim([_mi, _ma])
ax.set_ylabel('F(T)')
ax.set_xlabel('T')
ax.set_xlim([0, len(original)])
#plt.colorbar()
Util.showAndSaveImage(fig, file, save)
def plotCompared(original, forecasts, labels, title):
fig = plt.figure(figsize=[13, 6])
ax = fig.add_subplot(111)
ax.plot(original, color='k', label="Original")
for c in range(0, len(forecasts)):
ax.plot(forecasts[c], label=labels[c])
handles0, labels0 = ax.get_legend_handles_labels()
ax.legend(handles0, labels0)
ax.set_title(title)
ax.set_ylabel('F(T)')
ax.set_xlabel('T')
ax.set_xlim([0, len(original)])
ax.set_ylim([min(original), max(original)])
def SelecaoSimples_MenorRMSE(original, parameters, modelo):
ret = []
errors = []
forecasted_best = []
print("Série Original")
fig = plt.figure(figsize=[20, 12])
fig.suptitle("Comparação de modelos ")
ax0 = fig.add_axes([0, 0.5, 0.65, 0.45]) # left, bottom, width, height
ax0.set_xlim([0, len(original)])
ax0.set_ylim([min(original), max(original)])
ax0.set_title('Série Temporal')
ax0.set_ylabel('F(T)')
ax0.set_xlabel('T')
ax0.plot(original, label="Original")
min_rmse = 100000.0
best = None
for p in parameters:
sets = Grid.GridPartitionerTrimf(original, p)
fts = modelo(str(p) + " particoes")
fts.train(original, sets)
# print(original)
forecasted = fts.forecast(original)
forecasted.insert(0, original[0])
# print(forecasted)
ax0.plot(forecasted, label=fts.name)
error = Measures.rmse(np.array(forecasted), np.array(original))
print(p, error)
errors.append(error)
if error < min_rmse:
min_rmse = error
best = fts
forecasted_best = forecasted
handles0, labels0 = ax0.get_legend_handles_labels()
ax0.legend(handles0, labels0)
ax1 = fig.add_axes([0.7, 0.5, 0.3, 0.45]) # left, bottom, width, height
ax1.set_title('Comparação dos Erros Quadráticos Médios')
ax1.set_ylabel('RMSE')
ax1.set_xlabel('Quantidade de Partições')
ax1.set_xlim([min(parameters), max(parameters)])
ax1.plot(parameters, errors)
ret.append(best)
ret.append(forecasted_best)
# Modelo diferencial
print("\nSérie Diferencial")
difffts = Transformations.differential(original)
errors = []
forecastedd_best = []
ax2 = fig.add_axes([0, 0, 0.65, 0.45]) # left, bottom, width, height
ax2.set_xlim([0, len(difffts)])
ax2.set_ylim([min(difffts), max(difffts)])
ax2.set_title('Série Temporal')
ax2.set_ylabel('F(T)')
ax2.set_xlabel('T')
ax2.plot(difffts, label="Original")
min_rmse = 100000.0
bestd = None
for p in parameters:
sets = Grid.GridPartitionerTrimf(difffts, p)
fts = modelo(str(p) + " particoes")
fts.train(difffts, sets)
forecasted = fts.forecast(difffts)
forecasted.insert(0, difffts[0])
ax2.plot(forecasted, label=fts.name)
error = Measures.rmse(np.array(forecasted), np.array(difffts))
print(p, error)
errors.append(error)
if error < min_rmse:
min_rmse = error
bestd = fts
forecastedd_best = forecasted
handles0, labels0 = ax2.get_legend_handles_labels()
ax2.legend(handles0, labels0)
ax3 = fig.add_axes([0.7, 0, 0.3, 0.45]) # left, bottom, width, height
ax3.set_title('Comparação dos Erros Quadráticos Médios')
ax3.set_ylabel('RMSE')
ax3.set_xlabel('Quantidade de Partições')
ax3.set_xlim([min(parameters), max(parameters)])
ax3.plot(parameters, errors)
ret.append(bestd)
ret.append(forecastedd_best)
return ret
def compareModelsPlot(original, models_fo, models_ho):
fig = plt.figure(figsize=[13, 6])
fig.suptitle("Comparação de modelos ")
ax0 = fig.add_axes([0, 0, 1, 1]) # left, bottom, width, height
rows = []
for model in models_fo:
fts = model["model"]
ax0.plot(model["forecasted"], label=model["name"])
for model in models_ho:
fts = model["model"]
ax0.plot(model["forecasted"], label=model["name"])
handles0, labels0 = ax0.get_legend_handles_labels()
ax0.legend(handles0, labels0)
def compareModelsTable(original, models_fo, models_ho):
fig = plt.figure(figsize=[12, 4])
fig.suptitle("Comparação de modelos ")
columns = ['Modelo', 'Ordem', 'Partições', 'RMSE', 'MAPE (%)']
rows = []
for model in models_fo:
fts = model["model"]
error_r = Measures.rmse(model["forecasted"], original)
error_m = round(Measures.mape(model["forecasted"], original) * 100, 2)
rows.append([model["name"], fts.order, len(fts.sets), error_r, error_m])
for model in models_ho:
fts = model["model"]
error_r = Measures.rmse(model["forecasted"][fts.order:], original[fts.order:])
error_m = round(Measures.mape(model["forecasted"][fts.order:], original[fts.order:]) * 100, 2)
rows.append([model["name"], fts.order, len(fts.sets), error_r, error_m])
ax1 = fig.add_axes([0, 0, 1, 1]) # left, bottom, width, height
ax1.set_xticks([])
ax1.set_yticks([])
ax1.table(cellText=rows,
colLabels=columns,
cellLoc='center',
bbox=[0, 0, 1, 1])
sup = "\\begin{tabular}{"
header = ""
body = ""
footer = ""
for c in columns:
sup = sup + "|c"
if len(header) > 0:
header = header + " & "
header = header + "\\textbf{" + c + "} "
sup = sup + "|} \\hline\n"
header = header + "\\\\ \\hline \n"
for r in rows:
lin = ""
for c in r:
if len(lin) > 0:
lin = lin + " & "
lin = lin + str(c)
body = body + lin + "\\\\ \\hline \n"
return sup + header + body + "\\end{tabular}"
def simpleSearch_RMSE(train, test, model, partitions, orders, save=False, file=None, tam=[10, 15],
plotforecasts=False, elev=30, azim=144, intervals=False,parameters=None,
partitioner=Grid.GridPartitioner,transformation=None,indexer=None):
_3d = len(orders) > 1
ret = []
errors = np.array([[0 for k in range(len(partitions))] for kk in range(len(orders))])
forecasted_best = []
fig = plt.figure(figsize=tam)
# fig.suptitle("Comparação de modelos ")
if plotforecasts:
ax0 = fig.add_axes([0, 0.4, 0.9, 0.5]) # left, bottom, width, height
ax0.set_xlim([0, len(train)])
ax0.set_ylim([min(train) * 0.9, max(train) * 1.1])
ax0.set_title('Forecasts')
ax0.set_ylabel('F(T)')
ax0.set_xlabel('T')
min_rmse = 1000000.0
best = None
for pc, p in enumerate(partitions, start=0):
sets = partitioner(train, p, transformation=transformation).sets
for oc, o in enumerate(orders, start=0):
fts = model("q = " + str(p) + " n = " + str(o))
fts.appendTransformation(transformation)
fts.train(train, sets, o, parameters=parameters)
if not intervals:
forecasted = fts.forecast(test)
if not fts.hasSeasonality:
error = Measures.rmse(np.array(test[o:]), np.array(forecasted[:-1]))
else:
error = Measures.rmse(np.array(test[o:]), np.array(forecasted))
for kk in range(o):
forecasted.insert(0, None)
if plotforecasts: ax0.plot(forecasted, label=fts.name)
else:
forecasted = fts.forecastInterval(test)
error = 1.0 - Measures.rmse_interval(np.array(test[o:]), np.array(forecasted[:-1]))
errors[oc, pc] = error
if error < min_rmse:
min_rmse = error
best = fts
forecasted_best = forecasted
# print(min_rmse)
if plotforecasts:
# handles0, labels0 = ax0.get_legend_handles_labels()
# ax0.legend(handles0, labels0)
ax0.plot(test, label="Original", linewidth=3.0, color="black")
if _3d: ax1 = Axes3D(fig, rect=[0, 1, 0.9, 0.9], elev=elev, azim=azim)
if not plotforecasts: ax1 = Axes3D(fig, rect=[0, 1, 0.9, 0.9], elev=elev, azim=azim)
# ax1 = fig.add_axes([0.6, 0.5, 0.45, 0.45], projection='3d')
if _3d:
ax1.set_title('Error Surface')
ax1.set_ylabel('Model order')
ax1.set_xlabel('Number of partitions')
ax1.set_zlabel('RMSE')
X, Y = np.meshgrid(partitions, orders)
surf = ax1.plot_surface(X, Y, errors, rstride=1, cstride=1, antialiased=True)
else:
ax1 = fig.add_axes([0, 1, 0.9, 0.9])
ax1.set_title('Error Curve')
ax1.set_ylabel('Number of partitions')
ax1.set_xlabel('RMSE')
ax0.plot(errors,partitions)
ret.append(best)
ret.append(forecasted_best)
ret.append(min_rmse)
# plt.tight_layout()
Util.showAndSaveImage(fig, file, save)
return ret
def sliding_window_simple_search(data, windowsize, model, partitions, orders, save=False, file=None, tam=[10, 15],
plotforecasts=False, elev=30, azim=144, intervals=False, parameters=None):
_3d = len(orders) > 1
ret = []
errors = np.array([[0 for k in range(len(partitions))] for kk in range(len(orders))])
forecasted_best = []
fig = plt.figure(figsize=tam)
# fig.suptitle("Comparação de modelos ")
if plotforecasts:
ax0 = fig.add_axes([0, 0.4, 0.9, 0.5]) # left, bottom, width, height
ax0.set_xlim([0, len(data)])
ax0.set_ylim([min(data) * 0.9, max(data) * 1.1])
ax0.set_title('Forecasts')
ax0.set_ylabel('F(T)')
ax0.set_xlabel('T')
min_rmse = 1000000.0
best = None
for pc, p in enumerate(partitions, start=0):
sets = Grid.GridPartitioner(data, p).sets
for oc, o in enumerate(orders, start=0):
_error = []
for ct, train, test in Util.sliding_window(data, windowsize, 0.8):
fts = model("q = " + str(p) + " n = " + str(o))
fts.train(data, sets, o, parameters=parameters)
if not intervals:
forecasted = fts.forecast(test)
if not fts.hasSeasonality:
_error.append( Measures.rmse(np.array(test[o:]), np.array(forecasted[:-1])) )
else:
_error.append( Measures.rmse(np.array(test[o:]), np.array(forecasted)) )
for kk in range(o):
forecasted.insert(0, None)
if plotforecasts: ax0.plot(forecasted, label=fts.name)
else:
forecasted = fts.forecastInterval(test)
_error.append( 1.0 - Measures.rmse_interval(np.array(test[o:]), np.array(forecasted[:-1])) )
error = np.nanmean(_error)
errors[oc, pc] = error
if error < min_rmse:
min_rmse = error
best = fts
forecasted_best = forecasted
# print(min_rmse)
if plotforecasts:
# handles0, labels0 = ax0.get_legend_handles_labels()
# ax0.legend(handles0, labels0)
ax0.plot(test, label="Original", linewidth=3.0, color="black")
if _3d: ax1 = Axes3D(fig, rect=[0, 1, 0.9, 0.9], elev=elev, azim=azim)
if not plotforecasts: ax1 = Axes3D(fig, rect=[0, 1, 0.9, 0.9], elev=elev, azim=azim)
# ax1 = fig.add_axes([0.6, 0.5, 0.45, 0.45], projection='3d')
if _3d:
ax1.set_title('Error Surface')
ax1.set_ylabel('Model order')
ax1.set_xlabel('Number of partitions')
ax1.set_zlabel('RMSE')
X, Y = np.meshgrid(partitions, orders)
surf = ax1.plot_surface(X, Y, errors, rstride=1, cstride=1, antialiased=True)
else:
ax1 = fig.add_axes([0, 1, 0.9, 0.9])
ax1.set_title('Error Curve')
ax1.set_ylabel('Number of partitions')
ax1.set_xlabel('RMSE')
ax0.plot(errors,partitions)
ret.append(best)
ret.append(forecasted_best)
# plt.tight_layout()
Util.showAndSaveImage(fig, file, save)
return ret
def pftsExploreOrderAndPartitions(data,save=False, file=None):
fig, axes = plt.subplots(nrows=4, ncols=1, figsize=[6, 8])
data_fs1 = Grid.GridPartitionerTrimf(data, 10)
mi = []
ma = []
axes[0].set_title('Point Forecasts by Order')
axes[2].set_title('Interval Forecasts by Order')
for order in np.arange(1, 6):
fts = pwfts.ProbabilisticWeightedFTS("")
fts.shortname = "n = " + str(order)
fts.train(data, data_fs1, order=order)
point_forecasts = fts.forecast(data)
interval_forecasts = fts.forecastInterval(data)
lower = [kk[0] for kk in interval_forecasts]
upper = [kk[1] for kk in interval_forecasts]
mi.append(min(lower) * 0.95)
ma.append(max(upper) * 1.05)
for k in np.arange(0, order):
point_forecasts.insert(0, None)
lower.insert(0, None)
upper.insert(0, None)
axes[0].plot(point_forecasts, label=fts.shortname)
axes[2].plot(lower, label=fts.shortname)
axes[2].plot(upper)
axes[1].set_title('Point Forecasts by Number of Partitions')
axes[3].set_title('Interval Forecasts by Number of Partitions')
for partitions in np.arange(5, 11):
data_fs = Grid.GridPartitionerTrimf(data, partitions)
fts = pwfts.ProbabilisticWeightedFTS("")
fts.shortname = "q = " + str(partitions)
fts.train(data, data_fs, 1)
point_forecasts = fts.forecast(data)
interval_forecasts = fts.forecastInterval(data)
lower = [kk[0] for kk in interval_forecasts]
upper = [kk[1] for kk in interval_forecasts]
mi.append(min(lower) * 0.95)
ma.append(max(upper) * 1.05)
point_forecasts.insert(0, None)
lower.insert(0, None)
upper.insert(0, None)
axes[1].plot(point_forecasts, label=fts.shortname)
axes[3].plot(lower, label=fts.shortname)
axes[3].plot(upper)
for ax in axes:
ax.set_ylabel('F(T)')
ax.set_xlabel('T')
ax.plot(data, label="Original", color="black", linewidth=1.5)
handles, labels = ax.get_legend_handles_labels()
ax.legend(handles, labels, loc=2, bbox_to_anchor=(1, 1))
ax.set_ylim([min(mi), max(ma)])
ax.set_xlim([0, len(data)])
plt.tight_layout()
Util.showAndSaveImage(fig, file, save)