pyFTS/benchmarks/benchmarks.py
2017-05-05 15:01:45 -03:00

1340 lines
52 KiB
Python

#!/usr/bin/python
# -*- coding: utf8 -*-
"""Benchmarks to FTS methods"""
import numpy as np
import pandas as pd
import time
import datetime
import matplotlib as plt
import matplotlib.colors as pltcolors
import matplotlib.cm as cmx
import matplotlib.pyplot as plt
from mpl_toolkits.mplot3d import Axes3D
# from sklearn.cross_validation import KFold
from pyFTS.partitioners import partitioner, Grid, Huarng, Entropy, FCM
from pyFTS.benchmarks import Measures, naive, arima, ResidualAnalysis, ProbabilityDistribution, Util, quantreg
from pyFTS.common import Membership, FuzzySet, FLR, Transformations, Util
from pyFTS import fts, chen, yu, ismailefendi, sadaei, hofts, hwang, pwfts, ifts
from copy import deepcopy
colors = ['grey', 'rosybrown', 'maroon', 'red','orange', 'yellow', 'olive', 'green',
'cyan', 'blue', 'darkblue', 'purple', 'darkviolet']
ncol = len(colors)
styles = ['-','--','-.',':','.']
nsty = len(styles)
def get_benchmark_point_methods():
"""Return all non FTS methods for point forecast"""
return [naive.Naive, arima.ARIMA]
def get_point_methods():
"""Return all FTS methods for point forecast"""
return [chen.ConventionalFTS, yu.WeightedFTS, ismailefendi.ImprovedWeightedFTS,
sadaei.ExponentialyWeightedFTS, hofts.HighOrderFTS, pwfts.ProbabilisticWeightedFTS]
def get_benchmark_interval_methods():
"""Return all non FTS methods for interval forecast"""
return [quantreg.QuantileRegression]
def get_interval_methods():
"""Return all FTS methods for interval forecast"""
return [ifts.IntervalFTS, pwfts.ProbabilisticWeightedFTS]
def external_point_sliding_window(models, parameters, data, windowsize,train=0.8, dump=False,
save=False, file=None, sintetic=True):
"""
Sliding window benchmarks for non FTS point forecasters
:param models: non FTS point forecasters
:param parameters: parameters for each model
:param data: data set
:param windowsize: size of sliding window
:param train: percentual of sliding window data used to train the models
:param dump:
:param save: save results
:param file: file path to save the results
:param sintetic: if true only the average and standard deviation of the results
:return: DataFrame with the results
"""
objs = {}
lcolors = {}
rmse = {}
smape = {}
u = {}
times = {}
experiments = 0
for ct, train, test in Util.sliding_window(data, windowsize, train):
experiments += 1
for count, method in enumerate(models, start=0):
model = method("")
_start = time.time()
model.train(train, None, parameters=parameters[count])
_end = time.time()
_key = model.shortname
if dump: print(ct, _key)
if _key not in objs:
objs[_key] = model
lcolors[_key] = colors[count % ncol]
rmse[_key] = []
smape[_key] = []
u[_key] = []
times[_key] = []
_tdiff = _end - _start
try:
_start = time.time()
_rmse, _smape, _u = Measures.get_point_statistics(test, model, None)
_end = time.time()
rmse[_key].append(_rmse)
smape[_key].append(_smape)
u[_key].append(_u)
_tdiff += _end - _start
times[_key].append(_tdiff)
if dump: print(_rmse, _smape, _u, _tdiff)
except:
rmse[_key].append(np.nan)
smape[_key].append(np.nan)
u[_key].append(np.nan)
times[_key].append(np.nan)
return Util.save_dataframe_point(experiments, file, objs, rmse, save, sintetic, smape, times, u)
def point_sliding_window(data, windowsize, train=0.8,models=None,partitioners=[Grid.GridPartitioner],
partitions=[10], max_order=3,transformation=None,indexer=None,dump=False,
save=False, file=None, sintetic=True):
"""
Sliding window benchmarks for FTS point forecasters
:param data:
:param windowsize: size of sliding window
:param train: percentual of sliding window data used to train the models
:param models: FTS point forecasters
:param partitioners: Universe of Discourse partitioner
:param partitions: the max number of partitions on the Universe of Discourse
:param max_order: the max order of the models (for high order models)
:param transformation: data transformation
:param indexer: seasonal indexer
:param dump:
:param save: save results
:param file: file path to save the results
:param sintetic: if true only the average and standard deviation of the results
:return: DataFrame with the results
"""
_process_start = time.time()
print("Process Start: {0: %H:%M:%S}".format(datetime.datetime.now()))
if models is None:
models = get_point_methods()
objs = {}
lcolors = {}
rmse = {}
smape = {}
u = {}
times = {}
experiments = 0
for ct, train,test in Util.sliding_window(data, windowsize, train):
experiments += 1
for partition in partitions:
for partitioner in partitioners:
pttr = str(partitioner.__module__).split('.')[-1]
data_train_fs = partitioner(train, partition, transformation=transformation)
for count, model in enumerate(models, start=0):
mfts = model("")
_key = mfts.shortname + " " + pttr + " q = " + str(partition)
mfts.partitioner = data_train_fs
if not mfts.is_high_order:
if dump: print(ct,_key)
if _key not in objs:
objs[_key] = mfts
lcolors[_key] = colors[count % ncol]
rmse[_key] = []
smape[_key] = []
u[_key] = []
times[_key] = []
if transformation is not None:
mfts.appendTransformation(transformation)
_start = time.time()
mfts.train(train, data_train_fs.sets)
_end = time.time()
times[_key].append(_end - _start)
_start = time.time()
_rmse, _smape, _u = Measures.get_point_statistics(test, mfts, indexer)
_end = time.time()
rmse[_key].append(_rmse)
smape[_key].append(_smape)
u[_key].append(_u)
times[_key].append(_end - _start)
if dump: print(_rmse, _smape, _u)
else:
for order in np.arange(1, max_order + 1):
if order >= mfts.min_order:
mfts = model("")
_key = mfts.shortname + " n = " + str(order) + " " + pttr + " q = " + str(partition)
mfts.partitioner = data_train_fs
if dump: print(ct,_key)
if _key not in objs:
objs[_key] = mfts
lcolors[_key] = colors[count % ncol]
rmse[_key] = []
smape[_key] = []
u[_key] = []
times[_key] = []
if transformation is not None:
mfts.appendTransformation(transformation)
try:
_start = time.time()
mfts.train(train, data_train_fs.sets, order=order)
_end = time.time()
times[_key].append(_end - _start)
_start = time.time()
_rmse, _smape, _u = Measures.get_point_statistics(test, mfts, indexer)
_end = time.time()
rmse[_key].append(_rmse)
smape[_key].append(_smape)
u[_key].append(_u)
times[_key].append(_end - _start)
if dump: print(_rmse, _smape, _u)
except Exception as e:
print(e)
rmse[_key].append(np.nan)
smape[_key].append(np.nan)
u[_key].append(np.nan)
times[_key].append(np.nan)
_process_end = time.time()
print("Process End: {0: %H:%M:%S}".format(datetime.datetime.now()))
print("Process Duration: {0}".format(_process_end - _process_start))
return Util.save_dataframe_point(experiments, file, objs, rmse, save, sintetic, smape, times, u)
def all_point_forecasters(data_train, data_test, partitions, max_order=3, statistics=True, residuals=True,
series=True, save=False, file=None, tam=[20, 5], models=None, transformation=None,
distributions=False):
"""
Fixed data benchmark for FTS point forecasters
:param data_train: data used to train the models
:param data_test: data used to test the models
:param partitions: the max number of partitions on the Universe of Discourse
:param max_order: the max order of the models (for high order models)
:param statistics: print statistics
:param residuals: print and plot residuals
:param series: plot time series
:param save: save results
:param file: file path to save the results
:param tam: figure dimensions to plot the graphs
:param models: list of models to benchmark
:param transformation: data transformation
:param distributions: plot distributions
:return:
"""
if models is None:
models = get_point_methods()
objs = []
data_train_fs = Grid.GridPartitioner(data_train, partitions, transformation=transformation)
count = 1
lcolors = []
for count, model in enumerate(models, start=0):
#print(model)
mfts = model("")
if not mfts.is_high_order:
if transformation is not None:
mfts.appendTransformation(transformation)
mfts.train(data_train, data_train_fs.sets)
objs.append(mfts)
lcolors.append( colors[count % ncol] )
else:
for order in np.arange(1,max_order+1):
if order >= mfts.min_order:
mfts = model(" n = " + str(order))
if transformation is not None:
mfts.appendTransformation(transformation)
mfts.train(data_train, data_train_fs.sets, order=order)
objs.append(mfts)
lcolors.append(colors[(count + order) % ncol])
if statistics:
print_point_statistics(data_test, objs)
if residuals:
print(ResidualAnalysis.compareResiduals(data_test, objs))
ResidualAnalysis.plot_residuals(data_test, objs, save=save, file=file, tam=tam)
if series:
plot_compared_series(data_test, objs, lcolors, typeonlegend=False, save=save, file=file, tam=tam,
intervals=False)
if distributions:
lcolors.insert(0,'black')
pmfs = []
pmfs.append(
ProbabilityDistribution.ProbabilityDistribution("Original", 100, [min(data_test), max(data_test)], data=data_test) )
for m in objs:
forecasts = m.forecast(data_test)
pmfs.append(
ProbabilityDistribution.ProbabilityDistribution(m.shortname, 100, [min(data_test), max(data_test)],
data=forecasts))
print(getProbabilityDistributionStatistics(pmfs,data_test))
plot_probability_distributions(pmfs, lcolors, tam=tam)
def print_point_statistics(data, models, externalmodels = None, externalforecasts = None, indexers=None):
ret = "Model & Order & RMSE & SMAPE & Theil's U \\\\ \n"
for count,model in enumerate(models,start=0):
_rmse, _smape, _u = Measures.get_point_statistics(data, model, indexers)
ret += model.shortname + " & "
ret += str(model.order) + " & "
ret += str(_rmse) + " & "
ret += str(_smape)+ " & "
ret += str(_u)
#ret += str(round(Measures.TheilsInequality(np.array(data[fts.order:]), np.array(forecasts[:-1])), 4))
ret += " \\\\ \n"
if externalmodels is not None:
l = len(externalmodels)
for k in np.arange(0,l):
ret += externalmodels[k] + " & "
ret += " 1 & "
ret += str(round(Measures.rmse(data, externalforecasts[k][:-1]), 2)) + " & "
ret += str(round(Measures.smape(data, externalforecasts[k][:-1]), 2))+ " & "
ret += str(round(Measures.UStatistic(data, externalforecasts[k][:-1]), 2))
ret += " \\\\ \n"
print(ret)
def getProbabilityDistributionStatistics(pmfs, data):
ret = "Model & Entropy & Empirical Likelihood & Pseudo Likelihood \\\\ \n"
for k in pmfs:
ret += k.name + " & "
ret += str(k.entropy()) + " & "
ret += str(k.empiricalloglikelihood())+ " & "
ret += str(k.pseudologlikelihood(data))
ret += " \\\\ \n"
return ret
def save_dataframe_interval(coverage, experiments, file, objs, resolution, save, sharpness, sintetic, times):
ret = []
if sintetic:
for k in sorted(objs.keys()):
mod = []
mfts = objs[k]
mod.append(mfts.shortname)
mod.append(mfts.order)
mod.append(mfts.partitioner.name)
mod.append(mfts.partitioner.partitions)
mod.append(round(np.nanmean(sharpness[k]), 2))
mod.append(round(np.nanstd(sharpness[k]), 2))
mod.append(round(np.nanmean(resolution[k]), 2))
mod.append(round(np.nanstd(resolution[k]), 2))
mod.append(round(np.nanmean(coverage[k]), 2))
mod.append(round(np.nanstd(coverage[k]), 2))
mod.append(round(np.nanmean(times[k]), 2))
mod.append(round(np.nanstd(times[k]), 2))
mod.append(len(mfts))
ret.append(mod)
columns = ["Model", "Order", "Scheme", "Partitions", "SHARPAVG", "SHARPSTD", "RESAVG", "RESSTD", "COVAVG",
"COVSTD", "TIMEAVG", "TIMESTD", "SIZE"]
else:
for k in sorted(objs.keys()):
try:
mfts = objs[k]
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts),
'Sharpness']
tmp.extend(sharpness[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts),
'Resolution']
tmp.extend(resolution[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts),
'Coverage']
tmp.extend(coverage[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts),
'TIME']
tmp.extend(times[k])
ret.append(deepcopy(tmp))
except Exception as ex:
print("Erro ao salvar ", k)
print("Exceção ", ex)
columns = [str(k) for k in np.arange(0, experiments)]
columns.insert(0, "Model")
columns.insert(1, "Order")
columns.insert(2, "Scheme")
columns.insert(3, "Partitions")
columns.insert(4, "Size")
columns.insert(5, "Measure")
dat = pd.DataFrame(ret, columns=columns)
if save: dat.to_csv(Util.uniquefilename(file), sep=";")
return dat
def interval_sliding_window(data, windowsize, train=0.8,models=None,partitioners=[Grid.GridPartitioner],
partitions=[10], max_order=3,transformation=None,indexer=None,dump=False,
save=False, file=None, sintetic=True):
if models is None:
models = get_interval_methods()
objs = {}
lcolors = {}
sharpness = {}
resolution = {}
coverage = {}
times = {}
experiments = 0
for ct, training,test in Util.sliding_window(data, windowsize, train):
experiments += 1
for partition in partitions:
for partitioner in partitioners:
pttr = str(partitioner.__module__).split('.')[-1]
data_train_fs = partitioner(training, partition, transformation=transformation)
for count, model in enumerate(models, start=0):
mfts = model("")
_key = mfts.shortname + " " + pttr+ " q = " +str(partition)
mfts.partitioner = data_train_fs
if not mfts.is_high_order:
if dump: print(ct,_key)
if _key not in objs:
objs[_key] = mfts
lcolors[_key] = colors[count % ncol]
sharpness[_key] = []
resolution[_key] = []
coverage[_key] = []
times[_key] = []
if transformation is not None:
mfts.appendTransformation(transformation)
_start = time.time()
mfts.train(training, data_train_fs.sets)
_end = time.time()
_tdiff = _end - _start
_start = time.time()
_sharp, _res, _cov = Measures.get_interval_statistics(test, mfts)
_end = time.time()
_tdiff += _end - _start
sharpness[_key].append(_sharp)
resolution[_key].append(_res)
coverage[_key].append(_cov)
times[_key].append(_tdiff)
else:
for order in np.arange(1, max_order + 1):
if order >= mfts.min_order:
mfts = model("")
_key = mfts.shortname + " n = " + str(order) + " " + pttr + " q = " + str(partition)
mfts.partitioner = data_train_fs
if dump: print(ct,_key)
if _key not in objs:
objs[_key] = mfts
lcolors[_key] = colors[count % ncol]
sharpness[_key] = []
resolution[_key] = []
coverage[_key] = []
times[_key] = []
if transformation is not None:
mfts.appendTransformation(transformation)
_start = time.time()
mfts.train(training, data_train_fs.sets, order=order)
_end = time.time()
_tdiff = _end - _start
_start = time.time()
_sharp, _res, _cov = Measures.get_interval_statistics(test, mfts)
_end = time.time()
_tdiff += _end - _start
sharpness[_key].append(_sharp)
resolution[_key].append(_res)
coverage[_key].append(_cov)
times[_key].append(_tdiff)
return save_dataframe_interval(coverage, experiments, file, objs, resolution, save, sharpness, sintetic, times)
def all_interval_forecasters(data_train, data_test, partitions, max_order=3,save=False, file=None, tam=[20, 5],
models=None, transformation=None):
if models is None:
models = get_interval_methods()
objs = []
data_train_fs = Grid.GridPartitioner(data_train,partitions, transformation=transformation).sets
lcolors = []
for count, model in Util.enumerate2(models, start=0, step=2):
mfts = model("")
if not mfts.is_high_order:
if transformation is not None:
mfts.appendTransformation(transformation)
mfts.train(data_train, data_train_fs)
objs.append(mfts)
lcolors.append( colors[count % ncol] )
else:
for order in np.arange(1,max_order+1):
if order >= mfts.min_order:
mfts = model(" n = " + str(order))
if transformation is not None:
mfts.appendTransformation(transformation)
mfts.train(data_train, data_train_fs, order=order)
objs.append(mfts)
lcolors.append(colors[count % ncol])
print_interval_statistics(data_test, objs)
plot_compared_series(data_test, objs, lcolors, typeonlegend=False, save=save, file=file, tam=tam, intervals=True)
def print_interval_statistics(original, models):
ret = "Model & Order & Sharpness & Resolution & Coverage \\\\ \n"
for fts in models:
_sharp, _res, _cov = Measures.get_interval_statistics(original, fts)
ret += fts.shortname + " & "
ret += str(fts.order) + " & "
ret += str(_sharp) + " & "
ret += str(_res) + " & "
ret += str(_cov) + " \\\\ \n"
print(ret)
def plot_distribution(dist):
for k in dist.index:
alpha = np.array([dist[x][k] for x in dist]) * 100
x = [k for x in np.arange(0, len(alpha))]
y = dist.columns
plt.scatter(x, y, c=alpha, marker='s', linewidths=0, cmap='Oranges', norm=pltcolors.Normalize(vmin=0, vmax=1),
vmin=0, vmax=1, edgecolors=None)
def plot_compared_series(original, models, colors, typeonlegend=False, save=False, file=None, tam=[20, 5],
points=True, intervals=True, linewidth=1.5):
fig = plt.figure(figsize=tam)
ax = fig.add_subplot(111)
mi = []
ma = []
legends = []
ax.plot(original, color='black', label="Original", linewidth=linewidth*1.5)
for count, fts in enumerate(models, start=0):
if fts.has_point_forecasting and points:
forecasted = fts.forecast(original)
mi.append(min(forecasted) * 0.95)
ma.append(max(forecasted) * 1.05)
for k in np.arange(0, fts.order):
forecasted.insert(0, None)
lbl = fts.shortname
if typeonlegend: lbl += " (Point)"
ax.plot(forecasted, color=colors[count], label=lbl, ls="-",linewidth=linewidth)
if fts.has_interval_forecasting and intervals:
forecasted = fts.forecastInterval(original)
lower = [kk[0] for kk in forecasted]
upper = [kk[1] for kk in forecasted]
mi.append(min(lower) * 0.95)
ma.append(max(upper) * 1.05)
for k in np.arange(0, fts.order):
lower.insert(0, None)
upper.insert(0, None)
lbl = fts.shortname
if typeonlegend: lbl += " (Interval)"
ax.plot(lower, color=colors[count], label=lbl, ls="--",linewidth=linewidth)
ax.plot(upper, color=colors[count], ls="--",linewidth=linewidth)
handles0, labels0 = ax.get_legend_handles_labels()
lgd = ax.legend(handles0, labels0, loc=2, bbox_to_anchor=(1, 1))
legends.append(lgd)
# ax.set_title(fts.name)
ax.set_ylim([min(mi), max(ma)])
ax.set_ylabel('F(T)')
ax.set_xlabel('T')
ax.set_xlim([0, len(original)])
Util.showAndSaveImage(fig, file, save, lgd=legends)
def plot_probability_distributions(pmfs, lcolors, tam=[15, 7]):
fig = plt.figure(figsize=tam)
ax = fig.add_subplot(111)
for k,m in enumerate(pmfs,start=0):
m.plot(ax, color=lcolors[k])
handles0, labels0 = ax.get_legend_handles_labels()
ax.legend(handles0, labels0)
def save_dataframe_ahead(experiments, file, objs, crps_interval, crps_distr, times1, times2, save, sintetic):
ret = []
if sintetic:
for k in sorted(objs.keys()):
try:
ret = []
for k in sorted(objs.keys()):
try:
mod = []
mfts = objs[k]
mod.append(mfts.shortname)
mod.append(mfts.order)
mod.append(mfts.partitioner.name)
mod.append(mfts.partitioner.partitions)
mod.append(np.round(np.nanmean(crps_interval[k]), 2))
mod.append(np.round(np.nanstd(crps_interval[k]), 2))
mod.append(np.round(np.nanmean(crps_distr[k]), 2))
mod.append(np.round(np.nanstd(crps_distr[k]), 2))
mod.append(len(mfts))
mod.append(np.round(np.nanmean(times1[k]), 4))
mod.append(np.round(np.nanmean(times2[k]), 4))
ret.append(mod)
except Exception as e:
print('Erro: %s' % e)
except Exception as ex:
print("Erro ao salvar ", k)
print("Exceção ", ex)
columns = ["Model", "Order", "Scheme", "Partitions", "CRPS1AVG", "CRPS1STD", "CRPS2AVG", "CRPS2STD",
"SIZE", "TIME1AVG", "TIME2AVG"]
else:
for k in sorted(objs.keys()):
try:
mfts = objs[k]
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts), 'CRPS_Interval']
tmp.extend(crps_interval[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts), 'CRPS_Distribution']
tmp.extend(crps_distr[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts), 'TIME_Interval']
tmp.extend(times1[k])
ret.append(deepcopy(tmp))
tmp = [mfts.shortname, mfts.order, mfts.partitioner.name, mfts.partitioner.partitions, len(mfts), 'TIME_Distribution']
tmp.extend(times2[k])
ret.append(deepcopy(tmp))
except Exception as ex:
print("Erro ao salvar ", k)
print("Exceção ", ex)
columns = [str(k) for k in np.arange(0, experiments)]
columns.insert(0, "Model")
columns.insert(1, "Order")
columns.insert(2, "Scheme")
columns.insert(3, "Partitions")
columns.insert(4, "Size")
columns.insert(5, "Measure")
dat = pd.DataFrame(ret, columns=columns)
if save: dat.to_csv(Util.uniquefilename(file), sep=";")
return dat
def ahead_sliding_window(data, windowsize, train, steps, models=None, resolution = None, partitioners=[Grid.GridPartitioner],
partitions=[10], max_order=3,transformation=None,indexer=None,dump=False,
save=False, file=None, sintetic=False):
if models is None:
models = [pwfts.ProbabilisticWeightedFTS]
objs = {}
lcolors = {}
crps_interval = {}
crps_distr = {}
times1 = {}
times2 = {}
experiments = 0
for ct, train,test in Util.sliding_window(data, windowsize, train):
experiments += 1
for partition in partitions:
for partitioner in partitioners:
pttr = str(partitioner.__module__).split('.')[-1]
data_train_fs = partitioner(train, partition, transformation=transformation)
for count, model in enumerate(models, start=0):
mfts = model("")
_key = mfts.shortname + " " + pttr+ " q = " +str(partition)
mfts.partitioner = data_train_fs
if not mfts.is_high_order:
if dump: print(ct,_key)
if _key not in objs:
objs[_key] = mfts
lcolors[_key] = colors[count % ncol]
crps_interval[_key] = []
crps_distr[_key] = []
times1[_key] = []
times2[_key] = []
if transformation is not None:
mfts.appendTransformation(transformation)
_start = time.time()
mfts.train(train, data_train_fs.sets)
_end = time.time()
_tdiff = _end - _start
_crps1, _crps2, _t1, _t2 = get_distribution_statistics(test,mfts,steps=steps,resolution=resolution)
crps_interval[_key].append(_crps1)
crps_distr[_key].append(_crps2)
times1[_key] = _tdiff + _t1
times2[_key] = _tdiff + _t2
if dump: print(_crps1, _crps2, _tdiff, _t1, _t2)
else:
for order in np.arange(1, max_order + 1):
if order >= mfts.min_order:
mfts = model("")
_key = mfts.shortname + " n = " + str(order) + " " + pttr + " q = " + str(partition)
mfts.partitioner = data_train_fs
if dump: print(ct,_key)
if _key not in objs:
objs[_key] = mfts
lcolors[_key] = colors[count % ncol]
crps_interval[_key] = []
crps_distr[_key] = []
times1[_key] = []
times2[_key] = []
if transformation is not None:
mfts.appendTransformation(transformation)
_start = time.time()
mfts.train(train, data_train_fs.sets, order=order)
_end = time.time()
_tdiff = _end - _start
_crps1, _crps2, _t1, _t2 = get_distribution_statistics(test, mfts, steps=steps,
resolution=resolution)
crps_interval[_key].append(_crps1)
crps_distr[_key].append(_crps2)
times1[_key] = _tdiff + _t1
times2[_key] = _tdiff + _t2
if dump: print(_crps1, _crps2, _tdiff, _t1, _t2)
return save_dataframe_ahead(experiments, file, objs, crps_interval, crps_distr, times1, times2, save, sintetic)
def all_ahead_forecasters(data_train, data_test, partitions, start, steps, resolution = None, max_order=3,save=False, file=None, tam=[20, 5],
models=None, transformation=None, option=2):
if models is None:
models = [pwfts.ProbabilisticWeightedFTS]
if resolution is None: resolution = (max(data_train) - min(data_train)) / 100
objs = []
data_train_fs = Grid.GridPartitioner(data_train, partitions, transformation=transformation).sets
lcolors = []
for count, model in Util.enumerate2(models, start=0, step=2):
mfts = model("")
if not mfts.is_high_order:
if transformation is not None:
mfts.appendTransformation(transformation)
mfts.train(data_train, data_train_fs)
objs.append(mfts)
lcolors.append( colors[count % ncol] )
else:
for order in np.arange(1,max_order+1):
if order >= mfts.min_order:
mfts = model(" n = " + str(order))
if transformation is not None:
mfts.appendTransformation(transformation)
mfts.train(data_train, data_train_fs, order=order)
objs.append(mfts)
lcolors.append(colors[count % ncol])
distributions = [False for k in objs]
distributions[0] = True
print_distribution_statistics(data_test[start:], objs, steps, resolution)
plot_compared_intervals_ahead(data_test, objs, lcolors, distributions=distributions, time_from=start, time_to=steps,
interpol=False, save=save, file=file, tam=tam, resolution=resolution, option=option)
def get_distribution_statistics(original, model, steps, resolution):
ret = list()
try:
_s1 = time.time()
densities1 = model.forecastAheadDistribution(original, steps, parameters=3)
_e1 = time.time()
ret.append(round(Measures.crps(original, densities1), 3))
ret.append(round(_e1 - _s1, 3))
except Exception as e:
print('Erro: ', e)
ret.append(np.nan)
ret.append(np.nan)
try:
_s2 = time.time()
densities2 = model.forecastAheadDistribution(original, steps, parameters=2)
_e2 = time.time()
ret.append( round(Measures.crps(original, densities2), 3))
ret.append(round(_e2 - _s2, 3))
except:
ret.append(np.nan)
ret.append(np.nan)
return ret
def print_distribution_statistics(original, models, steps, resolution):
ret = "Model & Order & Interval & Distribution \\\\ \n"
for fts in models:
_crps1, _crps2, _t1, _t2 = get_distribution_statistics(original, fts, steps, resolution)
ret += fts.shortname + " & "
ret += str(fts.order) + " & "
ret += str(_crps1) + " & "
ret += str(_crps2) + " \\\\ \n"
print(ret)
def plot_compared_intervals_ahead(original, models, colors, distributions, time_from, time_to,
interpol=False, save=False, file=None, tam=[20, 5], resolution=None,
cmap='Blues',option=2):
fig = plt.figure(figsize=tam)
ax = fig.add_subplot(111)
cm = plt.get_cmap(cmap)
cNorm = pltcolors.Normalize(vmin=0, vmax=1)
scalarMap = cmx.ScalarMappable(norm=cNorm, cmap=cm)
if resolution is None: resolution = (max(original) - min(original)) / 100
mi = []
ma = []
for count, fts in enumerate(models, start=0):
if fts.has_probability_forecasting and distributions[count]:
density = fts.forecastAheadDistribution(original[time_from - fts.order:time_from], time_to,
resolution=resolution, method=option)
Y = []
X = []
C = []
S = []
y = density.columns
t = len(y)
ss = time_to ** 2
for k in density.index:
#alpha = [scalarMap.to_rgba(density[col][k]) for col in density.columns]
col = [density[col][k]*5 for col in density.columns]
x = [time_from + k for x in np.arange(0, t)]
s = [ss for x in np.arange(0, t)]
ic = resolution/10
for cc in np.arange(0, resolution, ic):
Y.append(y + cc)
X.append(x)
C.append(col)
S.append(s)
Y = np.hstack(Y)
X = np.hstack(X)
C = np.hstack(C)
S = np.hstack(S)
s = ax.scatter(X, Y, c=C, marker='s',s=S, linewidths=0, edgecolors=None, cmap=cmap)
s.set_clim([0, 1])
cb = fig.colorbar(s)
cb.set_label('Density')
if fts.has_interval_forecasting:
forecasts = fts.forecastAheadInterval(original[time_from - fts.order:time_from], time_to)
lower = [kk[0] for kk in forecasts]
upper = [kk[1] for kk in forecasts]
mi.append(min(lower))
ma.append(max(upper))
for k in np.arange(0, time_from - fts.order):
lower.insert(0, None)
upper.insert(0, None)
ax.plot(lower, color=colors[count], label=fts.shortname)
ax.plot(upper, color=colors[count])
else:
forecasts = fts.forecast(original)
mi.append(min(forecasts))
ma.append(max(forecasts))
for k in np.arange(0, time_from):
forecasts.insert(0, None)
ax.plot(forecasts, color=colors[count], label=fts.shortname)
ax.plot(original, color='black', label="Original")
handles0, labels0 = ax.get_legend_handles_labels()
ax.legend(handles0, labels0, loc=2)
# ax.set_title(fts.name)
_mi = min(mi)
if _mi < 0:
_mi *= 1.1
else:
_mi *= 0.9
_ma = max(ma)
if _ma < 0:
_ma *= 0.9
else:
_ma *= 1.1
ax.set_ylim([_mi, _ma])
ax.set_ylabel('F(T)')
ax.set_xlabel('T')
ax.set_xlim([0, len(original)])
#plt.colorbar()
Util.showAndSaveImage(fig, file, save)
def plotCompared(original, forecasts, labels, title):
fig = plt.figure(figsize=[13, 6])
ax = fig.add_subplot(111)
ax.plot(original, color='k', label="Original")
for c in range(0, len(forecasts)):
ax.plot(forecasts[c], label=labels[c])
handles0, labels0 = ax.get_legend_handles_labels()
ax.legend(handles0, labels0)
ax.set_title(title)
ax.set_ylabel('F(T)')
ax.set_xlabel('T')
ax.set_xlim([0, len(original)])
ax.set_ylim([min(original), max(original)])
def SelecaoSimples_MenorRMSE(original, parameters, modelo):
ret = []
errors = []
forecasted_best = []
print("Série Original")
fig = plt.figure(figsize=[20, 12])
fig.suptitle("Comparação de modelos ")
ax0 = fig.add_axes([0, 0.5, 0.65, 0.45]) # left, bottom, width, height
ax0.set_xlim([0, len(original)])
ax0.set_ylim([min(original), max(original)])
ax0.set_title('Série Temporal')
ax0.set_ylabel('F(T)')
ax0.set_xlabel('T')
ax0.plot(original, label="Original")
min_rmse = 100000.0
best = None
for p in parameters:
sets = Grid.GridPartitioner(original, p).sets
fts = modelo(str(p) + " particoes")
fts.train(original, sets)
# print(original)
forecasted = fts.forecast(original)
forecasted.insert(0, original[0])
# print(forecasted)
ax0.plot(forecasted, label=fts.name)
error = Measures.rmse(np.array(forecasted), np.array(original))
print(p, error)
errors.append(error)
if error < min_rmse:
min_rmse = error
best = fts
forecasted_best = forecasted
handles0, labels0 = ax0.get_legend_handles_labels()
ax0.legend(handles0, labels0)
ax1 = fig.add_axes([0.7, 0.5, 0.3, 0.45]) # left, bottom, width, height
ax1.set_title('Comparação dos Erros Quadráticos Médios')
ax1.set_ylabel('RMSE')
ax1.set_xlabel('Quantidade de Partições')
ax1.set_xlim([min(parameters), max(parameters)])
ax1.plot(parameters, errors)
ret.append(best)
ret.append(forecasted_best)
# Modelo diferencial
print("\nSérie Diferencial")
difffts = Transformations.differential(original)
errors = []
forecastedd_best = []
ax2 = fig.add_axes([0, 0, 0.65, 0.45]) # left, bottom, width, height
ax2.set_xlim([0, len(difffts)])
ax2.set_ylim([min(difffts), max(difffts)])
ax2.set_title('Série Temporal')
ax2.set_ylabel('F(T)')
ax2.set_xlabel('T')
ax2.plot(difffts, label="Original")
min_rmse = 100000.0
bestd = None
for p in parameters:
sets = Grid.GridPartitionerTrimf(difffts, p)
fts = modelo(str(p) + " particoes")
fts.train(difffts, sets)
forecasted = fts.forecast(difffts)
forecasted.insert(0, difffts[0])
ax2.plot(forecasted, label=fts.name)
error = Measures.rmse(np.array(forecasted), np.array(difffts))
print(p, error)
errors.append(error)
if error < min_rmse:
min_rmse = error
bestd = fts
forecastedd_best = forecasted
handles0, labels0 = ax2.get_legend_handles_labels()
ax2.legend(handles0, labels0)
ax3 = fig.add_axes([0.7, 0, 0.3, 0.45]) # left, bottom, width, height
ax3.set_title('Comparação dos Erros Quadráticos Médios')
ax3.set_ylabel('RMSE')
ax3.set_xlabel('Quantidade de Partições')
ax3.set_xlim([min(parameters), max(parameters)])
ax3.plot(parameters, errors)
ret.append(bestd)
ret.append(forecastedd_best)
return ret
def compareModelsPlot(original, models_fo, models_ho):
fig = plt.figure(figsize=[13, 6])
fig.suptitle("Comparação de modelos ")
ax0 = fig.add_axes([0, 0, 1, 1]) # left, bottom, width, height
rows = []
for model in models_fo:
fts = model["model"]
ax0.plot(model["forecasted"], label=model["name"])
for model in models_ho:
fts = model["model"]
ax0.plot(model["forecasted"], label=model["name"])
handles0, labels0 = ax0.get_legend_handles_labels()
ax0.legend(handles0, labels0)
def compareModelsTable(original, models_fo, models_ho):
fig = plt.figure(figsize=[12, 4])
fig.suptitle("Comparação de modelos ")
columns = ['Modelo', 'Ordem', 'Partições', 'RMSE', 'MAPE (%)']
rows = []
for model in models_fo:
fts = model["model"]
error_r = Measures.rmse(model["forecasted"], original)
error_m = round(Measures.mape(model["forecasted"], original) * 100, 2)
rows.append([model["name"], fts.order, len(fts.sets), error_r, error_m])
for model in models_ho:
fts = model["model"]
error_r = Measures.rmse(model["forecasted"][fts.order:], original[fts.order:])
error_m = round(Measures.mape(model["forecasted"][fts.order:], original[fts.order:]) * 100, 2)
rows.append([model["name"], fts.order, len(fts.sets), error_r, error_m])
ax1 = fig.add_axes([0, 0, 1, 1]) # left, bottom, width, height
ax1.set_xticks([])
ax1.set_yticks([])
ax1.table(cellText=rows,
colLabels=columns,
cellLoc='center',
bbox=[0, 0, 1, 1])
sup = "\\begin{tabular}{"
header = ""
body = ""
footer = ""
for c in columns:
sup = sup + "|c"
if len(header) > 0:
header = header + " & "
header = header + "\\textbf{" + c + "} "
sup = sup + "|} \\hline\n"
header = header + "\\\\ \\hline \n"
for r in rows:
lin = ""
for c in r:
if len(lin) > 0:
lin = lin + " & "
lin = lin + str(c)
body = body + lin + "\\\\ \\hline \n"
return sup + header + body + "\\end{tabular}"
def simpleSearch_RMSE(train, test, model, partitions, orders, save=False, file=None, tam=[10, 15],
plotforecasts=False, elev=30, azim=144, intervals=False,parameters=None,
partitioner=Grid.GridPartitioner,transformation=None,indexer=None):
_3d = len(orders) > 1
ret = []
errors = np.array([[0 for k in range(len(partitions))] for kk in range(len(orders))])
forecasted_best = []
fig = plt.figure(figsize=tam)
# fig.suptitle("Comparação de modelos ")
if plotforecasts:
ax0 = fig.add_axes([0, 0.4, 0.9, 0.5]) # left, bottom, width, height
ax0.set_xlim([0, len(train)])
ax0.set_ylim([min(train) * 0.9, max(train) * 1.1])
ax0.set_title('Forecasts')
ax0.set_ylabel('F(T)')
ax0.set_xlabel('T')
min_rmse = 1000000.0
best = None
for pc, p in enumerate(partitions, start=0):
sets = partitioner(train, p, transformation=transformation).sets
for oc, o in enumerate(orders, start=0):
fts = model("q = " + str(p) + " n = " + str(o))
fts.appendTransformation(transformation)
fts.train(train, sets, o, parameters=parameters)
if not intervals:
forecasted = fts.forecast(test)
if not fts.has_seasonality:
error = Measures.rmse(np.array(test[o:]), np.array(forecasted[:-1]))
else:
error = Measures.rmse(np.array(test[o:]), np.array(forecasted))
for kk in range(o):
forecasted.insert(0, None)
if plotforecasts: ax0.plot(forecasted, label=fts.name)
else:
forecasted = fts.forecastInterval(test)
error = 1.0 - Measures.rmse_interval(np.array(test[o:]), np.array(forecasted[:-1]))
errors[oc, pc] = error
if error < min_rmse:
min_rmse = error
best = fts
forecasted_best = forecasted
# print(min_rmse)
if plotforecasts:
# handles0, labels0 = ax0.get_legend_handles_labels()
# ax0.legend(handles0, labels0)
ax0.plot(test, label="Original", linewidth=3.0, color="black")
if _3d: ax1 = Axes3D(fig, rect=[0, 1, 0.9, 0.9], elev=elev, azim=azim)
if not plotforecasts: ax1 = Axes3D(fig, rect=[0, 1, 0.9, 0.9], elev=elev, azim=azim)
# ax1 = fig.add_axes([0.6, 0.5, 0.45, 0.45], projection='3d')
if _3d:
ax1.set_title('Error Surface')
ax1.set_ylabel('Model order')
ax1.set_xlabel('Number of partitions')
ax1.set_zlabel('RMSE')
X, Y = np.meshgrid(partitions, orders)
surf = ax1.plot_surface(X, Y, errors, rstride=1, cstride=1, antialiased=True)
else:
ax1 = fig.add_axes([0, 1, 0.9, 0.9])
ax1.set_title('Error Curve')
ax1.set_ylabel('Number of partitions')
ax1.set_xlabel('RMSE')
ax0.plot(errors,partitions)
ret.append(best)
ret.append(forecasted_best)
ret.append(min_rmse)
# plt.tight_layout()
Util.showAndSaveImage(fig, file, save)
return ret
def sliding_window_simple_search(data, windowsize, model, partitions, orders, save=False, file=None, tam=[10, 15],
plotforecasts=False, elev=30, azim=144, intervals=False, parameters=None):
_3d = len(orders) > 1
ret = []
errors = np.array([[0 for k in range(len(partitions))] for kk in range(len(orders))])
forecasted_best = []
fig = plt.figure(figsize=tam)
# fig.suptitle("Comparação de modelos ")
if plotforecasts:
ax0 = fig.add_axes([0, 0.4, 0.9, 0.5]) # left, bottom, width, height
ax0.set_xlim([0, len(data)])
ax0.set_ylim([min(data) * 0.9, max(data) * 1.1])
ax0.set_title('Forecasts')
ax0.set_ylabel('F(T)')
ax0.set_xlabel('T')
min_rmse = 1000000.0
best = None
for pc, p in enumerate(partitions, start=0):
sets = Grid.GridPartitioner(data, p).sets
for oc, o in enumerate(orders, start=0):
_error = []
for ct, train, test in Util.sliding_window(data, windowsize, 0.8):
fts = model("q = " + str(p) + " n = " + str(o))
fts.train(data, sets, o, parameters=parameters)
if not intervals:
forecasted = fts.forecast(test)
if not fts.has_seasonality:
_error.append( Measures.rmse(np.array(test[o:]), np.array(forecasted[:-1])) )
else:
_error.append( Measures.rmse(np.array(test[o:]), np.array(forecasted)) )
for kk in range(o):
forecasted.insert(0, None)
if plotforecasts: ax0.plot(forecasted, label=fts.name)
else:
forecasted = fts.forecastInterval(test)
_error.append( 1.0 - Measures.rmse_interval(np.array(test[o:]), np.array(forecasted[:-1])) )
error = np.nanmean(_error)
errors[oc, pc] = error
if error < min_rmse:
min_rmse = error
best = fts
forecasted_best = forecasted
# print(min_rmse)
if plotforecasts:
# handles0, labels0 = ax0.get_legend_handles_labels()
# ax0.legend(handles0, labels0)
ax0.plot(test, label="Original", linewidth=3.0, color="black")
if _3d: ax1 = Axes3D(fig, rect=[0, 1, 0.9, 0.9], elev=elev, azim=azim)
if not plotforecasts: ax1 = Axes3D(fig, rect=[0, 1, 0.9, 0.9], elev=elev, azim=azim)
# ax1 = fig.add_axes([0.6, 0.5, 0.45, 0.45], projection='3d')
if _3d:
ax1.set_title('Error Surface')
ax1.set_ylabel('Model order')
ax1.set_xlabel('Number of partitions')
ax1.set_zlabel('RMSE')
X, Y = np.meshgrid(partitions, orders)
surf = ax1.plot_surface(X, Y, errors, rstride=1, cstride=1, antialiased=True)
else:
ax1 = fig.add_axes([0, 1, 0.9, 0.9])
ax1.set_title('Error Curve')
ax1.set_ylabel('Number of partitions')
ax1.set_xlabel('RMSE')
ax0.plot(errors,partitions)
ret.append(best)
ret.append(forecasted_best)
# plt.tight_layout()
Util.showAndSaveImage(fig, file, save)
return ret
def pftsExploreOrderAndPartitions(data,save=False, file=None):
fig, axes = plt.subplots(nrows=4, ncols=1, figsize=[6, 8])
data_fs1 = Grid.GridPartitioner(data, 10).sets
mi = []
ma = []
axes[0].set_title('Point Forecasts by Order')
axes[2].set_title('Interval Forecasts by Order')
for order in np.arange(1, 6):
fts = pwfts.ProbabilisticWeightedFTS("")
fts.shortname = "n = " + str(order)
fts.train(data, data_fs1, order=order)
point_forecasts = fts.forecast(data)
interval_forecasts = fts.forecastInterval(data)
lower = [kk[0] for kk in interval_forecasts]
upper = [kk[1] for kk in interval_forecasts]
mi.append(min(lower) * 0.95)
ma.append(max(upper) * 1.05)
for k in np.arange(0, order):
point_forecasts.insert(0, None)
lower.insert(0, None)
upper.insert(0, None)
axes[0].plot(point_forecasts, label=fts.shortname)
axes[2].plot(lower, label=fts.shortname)
axes[2].plot(upper)
axes[1].set_title('Point Forecasts by Number of Partitions')
axes[3].set_title('Interval Forecasts by Number of Partitions')
for partitions in np.arange(5, 11):
data_fs = Grid.GridPartitioner(data, partitions).sets
fts = pwfts.ProbabilisticWeightedFTS("")
fts.shortname = "q = " + str(partitions)
fts.train(data, data_fs, 1)
point_forecasts = fts.forecast(data)
interval_forecasts = fts.forecastInterval(data)
lower = [kk[0] for kk in interval_forecasts]
upper = [kk[1] for kk in interval_forecasts]
mi.append(min(lower) * 0.95)
ma.append(max(upper) * 1.05)
point_forecasts.insert(0, None)
lower.insert(0, None)
upper.insert(0, None)
axes[1].plot(point_forecasts, label=fts.shortname)
axes[3].plot(lower, label=fts.shortname)
axes[3].plot(upper)
for ax in axes:
ax.set_ylabel('F(T)')
ax.set_xlabel('T')
ax.plot(data, label="Original", color="black", linewidth=1.5)
handles, labels = ax.get_legend_handles_labels()
ax.legend(handles, labels, loc=2, bbox_to_anchor=(1, 1))
ax.set_ylim([min(mi), max(ma)])
ax.set_xlim([0, len(data)])
plt.tight_layout()
Util.showAndSaveImage(fig, file, save)